BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BA0AB019D03SP1|AL427472
         (1004 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig984                                                          127   4e-29
3x_Contig410                                                          121   2e-27

>3x_Contig984 
          Length = 4208

 Score =  127 bits (64), Expect = 4e-29
 Identities = 108/116 (93%), Gaps = 6/116 (5%)
 Strand = Plus / Plus

                                                                        
Query: 894  agttgaaaagatgtgctaagttgtggaamctgaggttgttatg-aatccgggtaataaga 952
            |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 2    agttgaaaagatgtgctaagttgtggaaactgaggttgttatgaaatccgggtaataaga 61

                                                                    
Query: 953  c-acgaaa-tttaaacacaaaac-aaacacg-ccagacatt-ktcaatatgacgaa 1003
            | |||||| |||||||||||||| ||||||| |||||||||  |||||||||||||
Sbjct: 62   caacgaaagtttaaacacaaaacaaaacacgcccagacattgttcaatatgacgaa 117


>3x_Contig410 
          Length = 1641

 Score =  121 bits (61), Expect = 2e-27
 Identities = 61/61 (100%)
 Strand = Plus / Minus

                                                                      
Query: 1  gatcacttctgcagaatcgtttttcactagagcaccgatgacacctagtgaagttagcct 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatcacttctgcagaatcgtttttcactagagcaccgatgacacctagtgaagttagcct 2

           
Query: 61 t 61
          |
Sbjct: 1  t 1


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.38    0.711     1.31 

Gapped
Lambda     K      H
    1.38    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6844
Number of Sequences: 1807
Number of extensions: 6844
Number of successful extensions: 119
Number of sequences better than 1.0e-20: 2
length of query: 1004
length of database: 10,358,551
effective HSP length: 16
effective length of query: 988
effective length of database: 10,329,639
effective search space: 10205683332
effective search space used: 10205683332
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)